RUPEE Protein Structure Search

This web site will be down from 11/11/2022 until sometime in late Winter or early Spring. If you need help running the RUPEE search on your own computer, don't hesitate to contact me at
Search the PDB, SCOP, CATH, or AlphaFold DB!
If you find this tool useful, please cite one or both of:
Ayoub R, Lee Y. RUPEE: A fast and accurate purely geometric protein structure search. PLoS ONE. 2019;14(3):1–17
Ayoub R, Lee Y. Protein structure search to support the development of protein structure prediction methods. Proteins: Structure, Function, and Bioinformatics. 2021;89(6):648-658
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e.g. 1eudA, 1eudA01, d1euda1 or e1eudA1